ESRTitle
1
Comparing tumour phylogenies from single cell data versus bulk sequencing data
2
The mechanisms of coding and non-coding oncogenic alterations
3
Identification of drivers of relapse and metastasis
4
Estimating tumour phylogenies from single-cell SNV and CNA data
5
Evolutionary history of circulating tumor cells and distant metastases
6
Identification and impact of clonal and subclonal driver alterations on cancer progression
7
Inferring tumour Evolution and Migration
8
Models and inference for Single-cell sequencing and tumour evolution
9
Evolution of drug resistance on genetic and phenotypic levels
10
Driver events, evolutionary dynamics and interplay with the external environment across cancer types
11
Estimation of tumour growth rates from NGS data
12
Mutational patterns and models within tumours
13
Integrated image and genomics
14
Spatial genetics and transcriptomics of pancreatic cancer
15
Reconciling tumour trees and multiple tumour progression models
 

ESR 1: Comparing tumour phylogenies
from single cell data versus bulk sequencing data


Supervisor: Florian Markowetz

Host Institution: University of Cambridge, United Kingdom



Early Stage Researcher: Michael Schneider
Project description (PDF)


ESR 2: The mechanisms of coding
and non-coding oncogenic alterations


Supervisor: Nuria Lopez-Bigas

Host Institution: Institute for Research in Biomedicine (IRB Barcelona), Barcelona, Spain


Early Stage Researcher: Hania Kranas
Project description (PDF)


ESR 3: Identification of drivers of relapse and metastasis


Supervisor: Nuria Lopez-Bigas

Host Institution: Institute for Research in Biomedicine (IRB Barcelona), Barcelona, Spain



Early Stage Researcher: Jose Bonet
Project description (PDF)

ESR 4: Estimating tumour phylogenies
from single-cell SNV and CNA data


Supervisor: Niko Beerenwinkel

Host Institution: ETH Zürich, Basel, Switzerland



Early Stage Researcher: Arthur Dondi
Project description (PDF)

ESR 5: Evolutionary history of circulating tumor cells
and distant metastases


Supervisor: Ewa Szczurek

Host Institution: University of Warsaw, Warsaw, Poland



Early Stage Researcher: Senbai Kang
Project description (PDF)

ESR 6: Identification and impact
of clonal and subclonal driver alterations on cancer progression


Supervisor: Francesca Ciccarelli

Host Institution: King’s College London and The Francis Crick Institute, London, United Kingdom


Early Stage Researcher: (Vacant)
Project description (PDF)

ESR 7: Inferring tumour Evolution and Migration


Supervisor: Niko Beerenwinkel

Host Institution: ETH Zürich, Basel, Switzerland



Early Stage Researcher: Nico Borgsmüller
Project description (PDF)

ESR 8: Models and inference
for single-cell sequencing and tumour evolution


Supervisor: Jens Lagergren

Host Institution: Royal Institute of Technology (KTH), Stockholm, Sweden



Early Stage Researcher: Mandi Chen
Project description (PDF)

ESR 9: Evolution of drug resistance on genetic and phenotypic levels


Supervisor: Ewa Szczurek

Host Institution: University of Warsaw, Warsaw, Poland



Early Stage Researcher: Shadi Darvish Shafighi
Project description (PDF)

ESR 10: Driver events, evolutionary dynamics and interplay
with the external environment across cancer types


Supervisor: Francesca Ciccarelli

Host Institution: King’s College London and The Francis Crick Institute, London, United Kingdom


Early Stage Researcher: Reda Keddar
Project description (PDF)

ESR 11: Estimation of tumour growth rates from NGS data


Supervisor: David Posada

Host Institution: University of Vigo, Vigo, Spain



Early Stage Researcher: Fausto Fabian Crespo Fernandez
Project description (PDF)

ESR 12: Mutational patterns and models within tumours


Supervisor: David Posada

Host Institution: University of Vigo, Vigo, Spain



Early Stage Researcher: Monica Valecha
Project description (PDF)

ESR 13: Integrated image and genomics


Supervisor: Yinyin Yuan

Host Institution: The Institute of Cancer Research, London, United Kingdom



Early Stage Researcher: Yeman Brhane Hagos
Project description (PDF)

ESR 14: Spatial genetics and transcriptomics of pancreatic cancer


Supervisor: Florian Markowetz

Host Institution: University of Cambridge, United Kingdom



Early Stage Researcher: Paula Martin-Gonzalez
Project description (PDF)

ESR 15: Reconciling tumour trees
and multiple tumour progression models


Supervisor: Jens Lagergren

Host Institution: Royal Institute of Technology (KTH), Stockholm, Sweden



Early Stage Researcher: Mohammadreza Mohaghegh Neyshabouri
Project description (PDF)